Taxonomy Summary. Current Level: Phylum
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TotalD6331.fecal.reference
LegendTaxonomy%%
  d__Archaea;p__Methanobacteriota 0.1% 0.1%
  d__Bacteria;p__Actinobacteriota 2.0% 2.0%
  d__Bacteria;p__Bacteroidota 30.0% 30.0%
  d__Bacteria;p__Firmicutes 0.9% 0.9%
  d__Bacteria;p__Firmicutes_A 23.3% 23.3%
  d__Bacteria;p__Firmicutes_C 19.0% 19.0%
  d__Bacteria;p__Fusobacteriota 4.5% 4.5%
  d__Bacteria;p__Proteobacteria 18.3% 18.3%
  d__Bacteria;p__Verrucomicrobiota 2.0% 2.0%
 
Taxonomy Summary. Current Level: Class
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TotalD6331.fecal.reference
LegendTaxonomy%%
  d__Archaea;p__Methanobacteriota;o__Methanobacteriales 0.1% 0.1%
  d__Bacteria;p__Actinobacteriota;o__Actinomycetales 2.0% 2.0%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales 30.0% 30.0%
  d__Bacteria;p__Firmicutes;o__Lactobacillales 0.9% 0.9%
  d__Bacteria;p__Firmicutes_A;o__Lachnospirales 5.5% 5.5%
  d__Bacteria;p__Firmicutes_A;o__Oscillospirales 15.2% 15.2%
  d__Bacteria;p__Firmicutes_A;o__Peptostreptococcales 2.6% 2.6%
  d__Bacteria;p__Firmicutes_C;o__Veillonellales 19.0% 19.0%
  d__Bacteria;p__Fusobacteriota;o__Fusobacteriales 4.5% 4.5%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales 18.3% 18.3%
  d__Bacteria;p__Verrucomicrobiota;o__Verrucomicrobiales 2.0% 2.0%
 
Taxonomy Summary. Current Level: Order
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TotalD6331.fecal.reference
LegendTaxonomy%%
  d__Archaea;p__Methanobacteriota;o__Methanobacteriales;f__Methanobacteriaceae 0.1% 0.1%
  d__Bacteria;p__Actinobacteriota;o__Actinomycetales;f__Bifidobacteriaceae 2.0% 2.0%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales;f__Bacteroidaceae 30.0% 30.0%
  d__Bacteria;p__Firmicutes;o__Lactobacillales;f__Lactobacillaceae 0.9% 0.9%
  d__Bacteria;p__Firmicutes_A;o__Lachnospirales;f__Lachnospiraceae 5.5% 5.5%
  d__Bacteria;p__Firmicutes_A;o__Oscillospirales;f__Ruminococcaceae 15.2% 15.2%
  d__Bacteria;p__Firmicutes_A;o__Peptostreptococcales;f__Peptostreptococcaceae 2.6% 2.6%
  d__Bacteria;p__Firmicutes_C;o__Veillonellales;f__Veillonellaceae 19.0% 19.0%
  d__Bacteria;p__Fusobacteriota;o__Fusobacteriales;f__Fusobacteriaceae 4.5% 4.5%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae 18.3% 18.3%
  d__Bacteria;p__Verrucomicrobiota;o__Verrucomicrobiales;f__Akkermansiaceae 2.0% 2.0%
 
Taxonomy Summary. Current Level: Family
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TotalD6331.fecal.reference
LegendTaxonomy%%
  d__Archaea;p__Methanobacteriota;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter_A 0.1% 0.1%
  d__Bacteria;p__Actinobacteriota;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium 2.0% 2.0%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides 21.5% 21.5%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella 8.5% 8.5%
  d__Bacteria;p__Firmicutes;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus 0.9% 0.9%
  d__Bacteria;p__Firmicutes_A;o__Lachnospirales;f__Lachnospiraceae;g__Roseburia 5.5% 5.5%
  d__Bacteria;p__Firmicutes_A;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium 15.2% 15.2%
  d__Bacteria;p__Firmicutes_A;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Clostridioides 2.6% 2.6%
  d__Bacteria;p__Firmicutes_C;o__Veillonellales;f__Veillonellaceae;g__Veillonella 19.0% 19.0%
  d__Bacteria;p__Fusobacteriota;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium 4.5% 4.5%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia 18.3% 18.3%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella 0.0% 0.0%
  d__Bacteria;p__Verrucomicrobiota;o__Verrucomicrobiales;f__Akkermansiaceae;g__Akkermansia 2.0% 2.0%
 
Taxonomy Summary. Current Level: Genus
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View Table (.tsv)
TotalD6331.fecal.reference
LegendTaxonomy%%
  d__Archaea;p__Methanobacteriota;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter_A;s__Methanobrevibacter_A smithii 0.1% 0.1%
  d__Bacteria;p__Actinobacteriota;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium adolescentis 2.0% 2.0%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides fragilis_A 21.5% 21.5%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;s__Prevotella corporis 8.5% 8.5%
  d__Bacteria;p__Firmicutes;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus;s__Limosilactobacillus fermentum 0.9% 0.9%
  d__Bacteria;p__Firmicutes_A;o__Lachnospirales;f__Lachnospiraceae;g__Roseburia;s__Roseburia hominis 5.5% 5.5%
  d__Bacteria;p__Firmicutes_A;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium;s__Faecalibacterium prausnitzii_E 15.2% 15.2%
  d__Bacteria;p__Firmicutes_A;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Clostridioides;s__Clostridioides difficile 2.6% 2.6%
  d__Bacteria;p__Firmicutes_C;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella rogosae 19.0% 19.0%
  d__Bacteria;p__Fusobacteriota;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium animalis 4.5% 4.5%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli 18.3% 18.3%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica 0.0% 0.0%
  d__Bacteria;p__Verrucomicrobiota;o__Verrucomicrobiales;f__Akkermansiaceae;g__Akkermansia;s__Akkermansia muciniphila_A 2.0% 2.0%
 
Taxonomy Summary. Current Level: Species
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TotalD6331.fecal.reference
LegendTaxonomy%%
  d__Archaea;p__Methanobacteriota;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter_A;s__Methanobrevibacter_A smithii;z__GCF_000016525.1 Methanobrevibacter smithii ATCC 35061 strain=ATCC 35061, PS, DSMZ 861, ASM1652v1 0.1% 0.1%
  d__Bacteria;p__Actinobacteriota;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium adolescentis;z__GCF_900445615.1 Bifidobacterium adolescentis strain=NCTC11814, 49964_F01 2.0% 2.0%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides fragilis_A;z__zymo15 21.5% 21.5%
  d__Bacteria;p__Bacteroidota;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;s__Prevotella corporis;z__zymo14 8.5% 8.5%
  d__Bacteria;p__Firmicutes;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus;s__Limosilactobacillus fermentum;z__in3684_7 MAG11 GCF_013394085.1 0.9% 0.9%
  d__Bacteria;p__Firmicutes_A;o__Lachnospirales;f__Lachnospiraceae;g__Roseburia;s__Roseburia hominis;z__in3684_7 MAG4 GCF_000225345.1 5.5% 5.5%
  d__Bacteria;p__Firmicutes_A;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium;s__Faecalibacterium prausnitzii_E;z__zymo11 15.2% 15.2%
  d__Bacteria;p__Firmicutes_A;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Clostridioides;s__Clostridioides difficile;z__GCA_018598985.1 Clostridioides difficile strain=CD191, ASM1859898v1 0.0% 0.0%
  d__Bacteria;p__Firmicutes_A;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Clostridioides;s__Clostridioides difficile;z__in3684_7 MAG10 GCF_001077535.1 2.6% 2.6%
  d__Bacteria;p__Firmicutes_C;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella rogosae;z__zymo12 19.0% 19.0%
  d__Bacteria;p__Fusobacteriota;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium animalis;z__zymo18 4.5% 4.5%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_000529855.1 Escherichia coli ISC7 strain=ISC7, ISC7v1 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_005153645.1 Escherichia coli strain=NRRL B-1109, ASM515364v1 0.6% 0.6%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_008122335.1 Escherichia coli strain=399730, ASM812233v1 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_013423055.1 Escherichia coli strain=7005_11, ASM1342305v1 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_014857325.1 Escherichia coli strain=COL20160015, ASM1485732v1 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_014857645.1 Escherichia coli strain=R274, ASM1485764v1 0.1% 0.1%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_017942545.1 Escherichia coli strain=TPS1, ASM1794254v1 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448155.1 Escherichia coli strain=NCTC10418, 32117_D02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448195.1 Escherichia coli strain=NCTC13400, 28824_D01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448295.1 Escherichia coli strain=NCTC11126, 28745_C01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448305.1 Escherichia coli strain=NCTC8009, 31530_E01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448355.1 Escherichia coli strain=NCTC7928, 36725_B02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448615.1 Escherichia coli strain=NCTC11112, 38344_G02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448645.1 Escherichia coli strain=NCTC13352, 32868_B01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900448955.1 Escherichia coli strain=NCTC10865, 38656_D02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449095.1 Escherichia coli strain=NCTC11341, 38891_C01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449125.1 Escherichia coli strain=NCTC8985, 38891_A02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449145.1 Escherichia coli strain=NCTC8622, 38891_H01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449295.1 Escherichia coli strain=NCTC9117, 39038_F01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449415.1 Escherichia coli strain=NCTC9073, 38891_G02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449615.1 Escherichia coli strain=NCTC9045, 39081_B01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449865.1 Escherichia coli strain=NCTC8179, 39282_C02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449925.1 Escherichia coli strain=NCTC9075, 39610_D01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900449995.1 Escherichia coli strain=NCTC10429, 39954_B01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900450065.1 Escherichia coli strain=NCTC9962, 39641_F01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900450075.1 Escherichia coli strain=NCTC13148, 40105_G02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900450085.1 Escherichia coli strain=NCTC9021, 40574_C02 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900450225.1 Escherichia coli strain=NCTC8500, 40295_F01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900450615.1 Escherichia coli strain=NCTC10757, 40295_H01 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_900660265.1 Escherichia coli O127:H6 str. E2348/69, S1_depleted_Ecoli_assemby_2hrs 0.0% 0.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCA_901482305.1 Escherichia coli strain=NCTC12650, 40105_H01 0.1% 0.1%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCF_000258145.1 Escherichia coli W strain=W, ASM25814v1 2.4% 2.4%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__GCF_003591595.1 Escherichia coli ATCC 8739 strain=ATCC 8739, ASM359159v1 1.0% 1.0%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;z__zymo24 13.9% 13.9%
  d__Bacteria;p__Proteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;z__GCF_005154105.1 Salmonella enterica subsp. enterica serovar Typhimurium strain=NRRL B-4212, ASM515410v1 0.0% 0.0%
  d__Bacteria;p__Verrucomicrobiota;o__Verrucomicrobiales;f__Akkermansiaceae;g__Akkermansia;s__Akkermansia muciniphila_A;z__zymo17 2.0% 2.0%