1 Sample Information

The Sample Information Table shows information for up to 10 samples. For projects with more than 10 samples, the Complete Sample Information Table can be accessed by clicking on the first link below the table. The Read Processing Summary Table can be accessed by clicking on the second link below the table.

More Information

Sample Information Table:
1. SampleID: unique identification code that was assigned to each sample.
2. CustomerLabel: sample name provided for the project and used in analyses.
3. Subgroup Columns: group comparison information, if group comparison information was provided for the project, is displayed in the remaining columns of the table.
4. RawdataFilenames: names of the associated raw sequencing files for each sample (available from the raw data package download).
5. FastQCResults: read quality results for each sample, click on the links to view the results.

Read Processing Summary Table:
1. SampleID: unique identification code that was assigned to each sample.
2. CustomerLabel: sample name provided for the project and used in analyses.
3. RawReads: number of raw sequences generated for each sample.
4. Reads Surviving(%): Percentage of reads survivng quality trimming.
5. Reads Dropped(%): Percentage of reads survivng quality trimming.


SampleID CustomerLabel Subgroup1 FastQCResults
in4404_1 D6300.Microbial.Community.Std.1 D6300.Std Read1;Read2
in4404_2 D6300.Microbial.Community.Std.2 D6300.Std Read1;Read2
in4404_11 Human.Fecal.1 Human.Fecal Read1;Read2
in4404_12 Human.Fecal.2 Human.Fecal Read1;Read2
in4404_21 Human.Skin.1 Human.Skin Read1;Read2
in4404_22 Human.Skin.2 Human.Skin Read1;Read2
in4404_31 Human.Oral.1 Human.Oral Read1;Read2
in4404_32 Human.Oral.2 Human.Oral Read1;Read2
in4404_41 Soil.1 Soil Read1;Read2
in4404_42 Soil.2 Soil Read1;Read2

Complete Sample Information Table

Read Processing Summary Table

2 Taxonomy Analysis Results

Click on the links below to view the results for each taxonomy analysis:

All Kingdoms

Eukaryotes

Prokaryotes

Virus

Read Distribution Summary

The following composition barplot shows the types of reads assigned to each sample in this project.

Read Distribution Summary Table

Genome Match Info Summary

Click on the link below to view the genome match info for each sample:

Results

3 Functional Pathway Profiling

Results

4 Antibiotic Resistance Profiling

Results

5 Virulence Factor Profiling

Results