1 Sample Information

The Sample Information Table shows information for up to 10 samples. For projects with more than 10 samples, the Complete Sample Information Table can be accessed by clicking on the first link below the table. The Read Processing Summary Table can be accessed by clicking on the second link below the table.

More Information

Sample Information Table:
1. SampleID: unique identification code that was assigned to each sample.
2. CustomerLabel: sample name provided for the project and used in analyses.
3. Subgroup Columns: group comparison information, if group comparison information was provided for the project, is displayed in the remaining columns of the table.
4. RawdataFilenames: names of the associated raw sequencing files for each sample (available from the raw data package download).
5. FastQCResults: read quality results for each sample, click on the links to view the results.

Read Processing Summary Table:
1. SampleID: unique identification code that was assigned to each sample.
2. CustomerLabel: sample name provided for the project and used in analyses.
3. RawReads: number of raw sequences generated for each sample.
4. Reads Surviving(%): Percentage of reads survivng quality trimming.
5. Reads Dropped(%): Percentage of reads survivng quality trimming.


SampleID CustomerLabel Category1 FastQCResults
in2197_1 20 depletion Read1;Read2
in2197_2 25 depletion Read1;Read2
in2197_3 36 depletion Read1;Read2
in2197_4 41 depletion Read1;Read2
in2197_5 46 depletion Read1;Read2
in2197_6 47 depletion Read1;Read2
in2197_7 66 depletion Read1;Read2
in2197_8 69 depletion Read1;Read2
in2197_9 76 depletion Read1;Read2
in2197_10 86 depletion Read1;Read2

Complete Sample Information Table

Read Processing Summary Table

2 Taxonomy Analysis Results

Click on the links below to view the results for each taxonomy analysis:

All Kingdoms

Eukaryotes

Prokaryotes

Virus

Read Distribution Summary

The following composition barplot shows the types of reads assigned to each sample in this project.

Read Distribution Summary Table

3 Functional Pathway Profiling

Results

4 Antibiotic Resistance Profiling

Results

5 Virulence Factor Profiling

Results